BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018B11LP1|AL427273
(971 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1713 1885 0.0
>3x_Contig1713
Length = 18539
Score = 1885 bits (950), Expect = 0.0
Identities = 968/972 (99%), Gaps = 2/972 (0%)
Strand = Plus / Minus
Query: 1 gatccttagaaacgatcttggaccccaatgaagtctttgccgccttgaacaagtaacttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11960 gatccttagaaacgatcttggaccccaatgaagtctttgccgccttgaacaagtaacttt 11901
Query: 61 tgaattcctcctgtgttgcagaagcagagatatcatcagcttgagagtccaaatgcgcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11900 tgaattcctcctgtgttgcagaagcagagatatcatcagcttgagagtccaaatgcgcga 11841
Query: 121 tggcgatttgagaagccttgtcaaacccattagcgatcttaatcggatgaacacctttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11840 tggcgatttgagaagccttgtcaaacccattagcgatcttaatcggatgaacacctttct 11781
Query: 181 cgatcaaatctaacgcttgatccaacaaggcacaagctagtacgacaacaccggtggtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11780 cgatcaaatctaacgcttgatccaacaaggcacaagctagtacgacaacaccggtggtac 11721
Query: 241 catcaccaatttcatcgtcctgcgacctggacaattggaccaacaacttggcgatttcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11720 catcaccaatttcatcgtcctgcgacctggacaattggaccaacaacttggcgatttcgt 11661
Query: 301 tatccaattccattctggaaagaatggtggcaccatcgttagtgatggtaatctcgccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11660 tatccaattccattctggaaagaatggtggcaccatcgttagtgatggtaatctcgccat 11601
Query: 361 ctggcgagattcagatcttatccaacccacgaggacccaaagaggtcttaatgatcgaag 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11600 ctggcgagattaagatcttatccaacccacgaggacccaaagaggtcttaatgatcgaag 11541
Query: 421 ccacggatctagaagctaggatatgtgatttcttagcatcgatcccatgctgtcttttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11540 ccacggatctagaagctaggatatgtgatttcttagcatcgatcccatgctgtcttttct 11481
Query: 481 tgttaccttggtctctaacgatgataaatggtctacccatttcatcttgagcgacaattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11480 tgttaccttggtctctaacgatgataaatggtctacccatttcatcttgagcgacaattg 11421
Query: 541 cgttggaaagatcgggcataggcacactcattttgaaacgatatcgatacggtgtgaatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11420 cgttggaaagatcgggcataggcacactcattttgaaacgatatcgatacggtgtgaatt 11361
Query: 601 gctggagttggggca-cgttcagaagtgatacgtctcattgaaaaccaacttccaatgtg 659
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11360 gctggagttggggcaccgttcagaagtgatacgtctcattgaaaaccaacttccaatgtg 11301
Query: 660 tttgaagattacatacatatttgatggcgctggacaatctgtaataattccatattacag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11300 tttgaagattacatacatatttgatggcgctggacaatctgtaataattccatattacag 11241
Query: 720 aattggaaaaaaaatacagggccgggtaacaacttattattatttaactctctctctcta 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11240 aattggaaaaaaaatacagggccgggtaacaacttattattatttaactctctctctcta 11181
Query: 780 ttatattatgtacacacatatatgtatatatgggggcgggcagaacagtgctcagttatt 839
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 11180 ttatattatgtacacacatatatgtatatat-ggggcgggcagaacagtgctcagttatt 11122
Query: 840 cgttctgaatctatatccacatgcggtgcatgtgtagaacaccgtggcaccttcatctgc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11121 cgttctgaatctatatccacatgcggtgcatgtgtagaacaccgtggcaccttcatctgc 11062
Query: 900 agatctaagctgtagagtgtggtaatgcatcttatcgttagcacatttcggacatttttc 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11061 agatctaagctgtagagtgtggtaatgcatcttatcgttagcacatttcggacatttttc 11002
Query: 960 gttgatgawagc 971
|||||||| |||
Sbjct: 11001 gttgatgatagc 10990
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7573
Number of Sequences: 1807
Number of extensions: 7573
Number of successful extensions: 87
Number of sequences better than 1.0e-20: 1
length of query: 971
length of database: 10,358,551
effective HSP length: 16
effective length of query: 955
effective length of database: 10,329,639
effective search space: 9864805245
effective search space used: 9864805245
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)